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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1119470 |
| Transcript ID | Lj4g3v1119470.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nitrate transporter 1.7-like [Glycine max] gi|356567570|ref|XP_003551991.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 34 | 34 | – | – | |
| SUPERFAMILY | 15 | 239 | 225 | 2.22E-26 | ||
| PANTHER | 17 | 573 | 557 | 0 | ||
| PANTHER | 17 | 573 | 557 | 0 | – | |
| TMHMM | 34 | 51 | 18 | – | – | |
| Gene3D | 35 | 233 | 199 | 1.40E-09 | – | |
| Phobius | 35 | 53 | 19 | – | – | |
| CDD | 39 | 236 | 198 | 6.19E-07 | ||
| Phobius | 54 | 59 | 6 | – | – | |
| Phobius | 60 | 83 | 24 | – | – | |
| TMHMM | 61 | 83 | 23 | – | – | |
| ProSitePatterns | 80 | 104 | 25 | – | ||
| Phobius | 84 | 94 | 11 | – | – | |
| Pfam | 91 | 515 | 425 | 7.10E-77 | ||
| TMHMM | 95 | 117 | 23 | – | – | |
| Phobius | 95 | 116 | 22 | – | – | |
| Phobius | 117 | 136 | 20 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 137 | 163 | 27 | – | – | |
| Phobius | 164 | 182 | 19 | – | – | |
| TMHMM | 180 | 202 | 23 | – | – | |
| Phobius | 183 | 203 | 21 | – | – | |
| Phobius | 204 | 209 | 6 | – | – | |
| Phobius | 210 | 228 | 19 | – | – | |
| TMHMM | 212 | 234 | 23 | – | – | |
| Phobius | 229 | 233 | 5 | – | – | |
| Phobius | 234 | 254 | 21 | – | – | |
| Phobius | 255 | 328 | 74 | – | – | |
| SUPERFAMILY | 317 | 555 | 239 | 2.22E-26 | ||
| Phobius | 329 | 349 | 21 | – | – | |
| TMHMM | 330 | 349 | 20 | – | – | |
| Phobius | 350 | 368 | 19 | – | – | |
| TMHMM | 369 | 391 | 23 | – | – | |
| Phobius | 369 | 390 | 22 | – | – | |
| Phobius | 391 | 410 | 20 | – | – | |
| TMHMM | 411 | 433 | 23 | – | – | |
| Phobius | 411 | 430 | 20 | – | – | |
| Phobius | 431 | 449 | 19 | – | – | |
| TMHMM | 448 | 470 | 23 | – | – | |
| Phobius | 450 | 469 | 20 | – | – | |
| Phobius | 470 | 489 | 20 | – | – | |
| Phobius | 490 | 513 | 24 | – | – | |
| TMHMM | 491 | 513 | 23 | – | – | |
| Phobius | 514 | 532 | 19 | – | – | |
| Phobius | 533 | 553 | 21 | – | – | |
| TMHMM | 533 | 552 | 20 | – | – | |
| Phobius | 554 | 579 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1119470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1119470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.