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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1288450 |
| Transcript ID | Lj4g3v1288450.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ileal sodium/bile acid cotransporter [Medicago truncatula] gi|357481845|ref|XP_003611208.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 100 | 100 | – | – | |
| PANTHER | 29 | 414 | 386 | 3.20E-202 | ||
| PANTHER | 29 | 414 | 386 | 3.20E-202 | – | |
| Phobius | 101 | 120 | 20 | – | – | |
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 121 | 125 | 5 | – | – | |
| Phobius | 126 | 143 | 18 | – | – | |
| Pfam | 130 | 312 | 183 | 3.60E-37 | ||
| Phobius | 144 | 170 | 27 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 171 | 197 | 27 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 198 | 216 | 19 | – | – | |
| Phobius | 217 | 244 | 28 | – | – | |
| TMHMM | 220 | 242 | 23 | – | – | |
| Phobius | 245 | 255 | 11 | – | – | |
| TMHMM | 254 | 276 | 23 | – | – | |
| Phobius | 256 | 275 | 20 | – | – | |
| Phobius | 276 | 286 | 11 | – | – | |
| TMHMM | 286 | 308 | 23 | – | – | |
| Phobius | 287 | 305 | 19 | – | – | |
| Phobius | 306 | 316 | 11 | – | – | |
| TMHMM | 315 | 337 | 23 | – | – | |
| Phobius | 317 | 337 | 21 | – | – | |
| Phobius | 338 | 379 | 42 | – | – | |
| Phobius | 380 | 402 | 23 | – | – | |
| TMHMM | 380 | 402 | 23 | – | – | |
| Phobius | 403 | 414 | 12 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj4g3v1288450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1288450.1, powered by CORGI.
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