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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1327500 |
| Transcript ID | Lj4g3v1327500.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | subtilase [Lotus japonicus] gi|163644220|dbj|BAF95753.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 528 | 528 | 0 | ||
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 528 | 528 | 0 | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 22 | 7 | – | – | |
| Phobius | 23 | 528 | 506 | – | – | |
| Pfam | 41 | 121 | 81 | 2.40E-11 | ||
| SUPERFAMILY | 123 | 384 | 262 | 7.07E-55 | ||
| CDD | 123 | 345 | 223 | 4.70E-106 | – | |
| Gene3D | 137 | 353 | 217 | 9.70E-55 | ||
| PRINTS | 146 | 165 | 20 | 1.50E-09 | ||
| Pfam | 146 | 523 | 378 | 2.20E-32 | ||
| ProSitePatterns | 151 | 162 | 12 | – | ||
| PRINTS | 215 | 228 | 14 | 1.50E-09 | ||
| CDD | 352 | 479 | 128 | 1.53E-39 | – | |
| Gene3D | 354 | 477 | 124 | 6.80E-09 | – | |
| Pfam | 393 | 464 | 72 | 1.20E-08 | ||
| SUPERFAMILY | 398 | 472 | 75 | 8.76E-05 | – | |
| Gene3D | 490 | 526 | 37 | 9.70E-55 | ||
| SUPERFAMILY | 494 | 526 | 33 | 7.07E-55 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj4g3v1327500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1327500.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.