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Lj4g3v1388350.2

Overview

Field Value
Gene ID Lj4g3v1388350
Transcript ID Lj4g3v1388350.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: uridine kinase-like protein 2, chloroplastic-like [Cicer arietinum] gi|502176210|ref|XP_004515823.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 40 40 – –
PANTHER
PTHR10285
31 385 355 1.30E-245 –
PANTHER
PTHR10285:SF71
31 385 355 1.30E-245
IPR029930
Gene3D
G3DSA:3.40.50.300
33 231 199 1.40E-77
IPR027417
SUPERFAMILY
SSF52540
34 229 196 1.91E-50
IPR027417
PRINTS
PR00988
36 53 18 1.10E-31
IPR000764
TIGRFAM
TIGR00235
37 236 200 1.10E-72
IPR000764
CDD
cd02023
38 236 199 2.78E-109 –
Pfam
PF00485
38 224 187 1.60E-45
IPR006083
PRINTS
PR00988
66 77 12 1.10E-31
IPR000764
PRINTS
PR00988
111 126 16 1.10E-31
IPR000764
ProSiteProfiles
PS50165
124 225 102 8.662
IPR001162
PRINTS
PR00988
168 178 11 1.10E-31
IPR000764
PRINTS
PR00988
182 193 12 1.10E-31
IPR000764
PRINTS
PR00988
204 217 14 1.10E-31
IPR000764
Gene3D
G3DSA:3.40.50.2020
235 384 150 9.10E-61
IPR029057
SUPERFAMILY
SSF53271
239 384 146 1.75E-34
IPR029057
Pfam
PF14681
254 384 131 7.10E-40
IPR029057
CDD
cd06223
309 384 76 2.66E-08
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of

Genome browser

LORE1 insertions 36

Expression data

Expression pattern

Expression pattern of Lj4g3v1388350.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1388350.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.