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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1388950 |
| Transcript ID | Lj4g3v1388950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transcription factor GTE8-like [Glycine max] gi|356513665|ref|XP_003525531.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | 101 | 121 | 21 | – | – | |
| MobiDBLite | 123 | 201 | 79 | – | – | |
| PANTHER | 136 | 524 | 389 | 1.60E-162 | – | |
| PANTHER | 136 | 524 | 389 | 1.60E-162 | – | |
| Gene3D | 174 | 322 | 149 | 2.40E-36 | ||
| SMART | 198 | 308 | 111 | 3.10E-35 | ||
| SUPERFAMILY | 200 | 311 | 112 | 8.90E-38 | ||
| CDD | 205 | 303 | 99 | 3.32E-57 | – | |
| Pfam | 209 | 292 | 84 | 9.70E-22 | ||
| ProSiteProfiles | 217 | 289 | 73 | 19.854 | ||
| PRINTS | 236 | 252 | 17 | 4.00E-16 | ||
| PRINTS | 252 | 270 | 19 | 4.00E-16 | ||
| PRINTS | 270 | 289 | 20 | 4.00E-16 | ||
| ProSiteProfiles | 349 | 433 | 85 | 15.881 | ||
| Pfam | 359 | 423 | 65 | 1.90E-14 | ||
| Coils | 359 | 379 | 21 | – | – | |
| MobiDBLite | 465 | 594 | 130 | – | – | |
| MobiDBLite | 618 | 696 | 79 | – | – | |
| Coils | 627 | 698 | 72 | – | – | |
| MobiDBLite | 712 | 738 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1388950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1388950.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.