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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027353
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.430s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0059669.1
n.a. PREDICTED: transcription factor GTE1-like [Cicer arietinum] gi|502086469|ref|XP_004488228.1| chr0 19780187 19787830 -
3 domain predictions
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Lj0g3v0224219.1
n.a. PREDICTED: transcription factor GTE1-like isoform X1 [Cicer arietinum] gi|502154173|ref|XP_004509610.1| chr0 115737561 115745447 -
3 domain predictions
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Lj0g3v0294979.1
n.a. global transcription factor group [Populus trichocarpa] gi|224098028|ref|XP_002311109.1| chr0 153326187 153327818 +
3 domain predictions
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Lj0g3v0309539.1
n.a. PREDICTED: transcription factor GTE4-like isoform X1 [Cicer arietinum] gi|502143906|ref|XP_004505511.1| chr0 161594799 161601052 +
3 domain predictions
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Lj1g3v0271590.1
n.a. PREDICTED: transcription factor GTE10-like [Glycine max] gi|356508786|ref|XP_003523135.1| chr1 3322601 3328095 -
3 domain predictions
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Lj1g3v0271590.2
n.a. PREDICTED: transcription factor GTE10-like [Glycine max] gi|356508786|ref|XP_003523135.1| chr1 3322601 3328095 -
3 domain predictions
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Lj1g3v3690440.1
n.a. Transcription factor GTE6 [Medicago truncatula] gi|357504047|ref|XP_003622312.1| chr1 42586385 42594858 -
3 domain predictions
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Lj1g3v3690440.3
n.a. Transcription factor GTE6 [Medicago truncatula] gi|357504047|ref|XP_003622312.1| chr1 42586385 42594858 -
3 domain predictions
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Lj1g3v3768350.2
n.a. PREDICTED: transcription factor GTE8-like [Glycine max] gi|356560519|ref|XP_003548539.1| chr1 43330644 43338569 -
3 domain predictions
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Lj1g3v3768350.3
n.a. PREDICTED: transcription factor GTE8-like [Glycine max] gi|356560519|ref|XP_003548539.1| chr1 43336589 43338569 -
3 domain predictions
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Lj3g3v2848820.1
n.a. PREDICTED: transcription factor GTE4-like [Glycine max] gi|356546972|ref|XP_003541893.1| chr3 35055318 35059462 +
3 domain predictions
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Lj3g3v2848820.2
n.a. PREDICTED: transcription factor GTE4-like [Glycine max] gi|356546972|ref|XP_003541893.1| chr3 35057278 35059462 +
3 domain predictions
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Lj4g3v0409420.1
n.a. PREDICTED: transcription factor GTE7-like isoform X1 [Cicer arietinum] gi|502142265|ref|XP_004504873.1| chr4 5179078 5181977 -
3 domain predictions
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Lj4g3v0409420.2
n.a. PREDICTED: transcription factor GTE7-like isoform X1 [Cicer arietinum] gi|502142265|ref|XP_004504873.1| chr4 5179078 5181977 -
3 domain predictions
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Lj4g3v1388950.1
n.a. PREDICTED: transcription factor GTE8-like [Glycine max] gi|356513665|ref|XP_003525531.1| chr4 21486628 21494059 +
3 domain predictions
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Lj6g3v2192090.1
n.a. PREDICTED: transcription factor GTE11-like [Glycine max] gi|356554838|ref|XP_003545749.1| chr6 25203817 25206365 +
3 domain predictions
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LotjaGi1g1v0235400.1
n.a. Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|V7AWA8|V7AWA8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0235400 LjG1.1_chr1 55630124 55640810 +
3 domain predictions
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LotjaGi1g1v0614700.1
n.a. Transcription factor GTE1; TAIR: AT5G40600.4 bromodomain testis-specific protein; Swiss-Prot: sp|Q9FT54|GTE6_ARATH Transcription factor GTE6; TrEMBL-Plants: tr|A0A0B2NX09|A0A0B2NX09_GLYSO Transcription factor GTE1; Found in the gene: LotjaGi1g1v0614700 LjG1.1_chr1 116031520 116040577 -
3 domain predictions
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LotjaGi1g1v0614700.2
n.a. Transcription factor GTE1; TAIR: AT5G40600.4 bromodomain testis-specific protein; Swiss-Prot: sp|Q9FT54|GTE6_ARATH Transcription factor GTE6; TrEMBL-Plants: tr|A0A0B2NX09|A0A0B2NX09_GLYSO Transcription factor GTE1; Found in the gene: LotjaGi1g1v0614700 LjG1.1_chr1 116031984 116040406 -
3 domain predictions
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LotjaGi1g1v0619600.1
n.a. Transcription factor GTE8; TAIR: AT3G27260.4 global transcription factor group E8; Swiss-Prot: sp|Q9LK27|GTE8_ARATH Transcription factor GTE8; TrEMBL-Plants: tr|A0A0S3RVN8|A0A0S3RVN8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619600 LjG1.1_chr1 116653053 116659816 -
3 domain predictions
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LotjaGi1g1v0619700.1
n.a. Transcription factor GTE8; TAIR: AT3G27260.4 global transcription factor group E8; Swiss-Prot: sp|Q9LK27|GTE8_ARATH Transcription factor GTE8; TrEMBL-Plants: tr|I1MLM9|I1MLM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619700 LjG1.1_chr1 116661317 116669820 -
3 domain predictions
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LotjaGi2g1v0101800.1
n.a. Transcription factor GTE1; TAIR: AT2G34900.1 Transcription factor GTE6; Swiss-Prot: sp|Q84XV2|GTE1_ARATH Transcription factor GTE1; TrEMBL-Plants: tr|V7C0T4|V7C0T4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0101800 LjG1.1_chr2 33858008 33872668 +
3 domain predictions
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LotjaGi3g1v0246800.1
n.a. Transcription factor GTE4; TAIR: AT1G06230.1 global transcription factor group E4; Swiss-Prot: sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4; TrEMBL-Plants: tr|K7KXX1|K7KXX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0246800 LjG1.1_chr3 40647002 40653396 +
3 domain predictions
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LotjaGi3g1v0449500.1
n.a. Transcription factor GTE4; TAIR: AT1G06230.1 global transcription factor group E4; Swiss-Prot: sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4; TrEMBL-Plants: tr|K7M2K1|K7M2K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0449500 LjG1.1_chr3 86301275 86305628 +
3 domain predictions
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LotjaGi4g1v0042000.1
n.a. Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0042000 LjG1.1_chr4 4958534 4961912 -
3 domain predictions
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LotjaGi4g1v0042000.2
n.a. Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0042000 LjG1.1_chr4 4958736 4961913 -
3 domain predictions
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LotjaGi4g1v0150600.1
n.a. Transcription factor GTE1; TAIR: AT2G34900.1 Transcription factor GTE6; Swiss-Prot: sp|Q84XV2|GTE1_ARATH Transcription factor GTE1; TrEMBL-Plants: tr|A0A0S3R458|A0A0S3R458_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0150600 LjG1.1_chr4 24815911 24824426 -
3 domain predictions
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LotjaGi4g1v0223700.1
n.a. Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|K7KMV6|K7KMV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0223700 LjG1.1_chr4 52918905 52926817 +
3 domain predictions
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LotjaGi4g1v0223700.2
n.a. Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|K7KMV6|K7KMV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0223700 LjG1.1_chr4 52918905 52927081 +
3 domain predictions
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LotjaGi6g1v0247400.1
n.a. Transcription factor GTE1; TAIR: AT2G34900.1 Transcription factor GTE6; Swiss-Prot: sp|Q84XV2|GTE1_ARATH Transcription factor GTE1; TrEMBL-Plants: tr|A0A0S3RIF5|A0A0S3RIF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0247400 LjG1.1_chr6 55951460 55959530 +
3 domain predictions
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LotjaGi6g1v0347400.1
n.a. Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347400 LjG1.1_chr6 66024027 66030369 +
3 domain predictions
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