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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1399990 |
| Transcript ID | Lj4g3v1399990.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein tipD-like [Glycine max] gi|356513836|ref|XP_003525614.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 513 | 508 | 1.00E-215 | – | |
| Pfam | 49 | 173 | 125 | 7.20E-15 | ||
| Coils | 91 | 160 | 70 | – | – | |
| Coils | 169 | 189 | 21 | – | – | |
| Gene3D | 211 | 514 | 304 | 6.10E-73 | ||
| SUPERFAMILY | 218 | 514 | 297 | 4.58E-70 | ||
| SMART | 219 | 258 | 40 | 1.10E-05 | ||
| CDD | 222 | 514 | 293 | 2.79E-60 | – | |
| Pfam | 222 | 258 | 37 | 0.0062 | ||
| ProSiteProfiles | 226 | 514 | 289 | 50.12 | ||
| ProSiteProfiles | 226 | 267 | 42 | 13.516 | ||
| ProSitePatterns | 245 | 259 | 15 | – | ||
| PRINTS | 245 | 259 | 15 | 1.80E-07 | ||
| SMART | 261 | 300 | 40 | 0.15 | ||
| ProSiteProfiles | 268 | 309 | 42 | 9.706 | ||
| SMART | 303 | 343 | 41 | 1.30E-08 | ||
| Pfam | 306 | 343 | 38 | 3.20E-05 | ||
| ProSiteProfiles | 310 | 352 | 43 | 12.814 | ||
| PRINTS | 330 | 344 | 15 | 1.80E-07 | ||
| ProSitePatterns | 330 | 344 | 15 | – | ||
| SMART | 346 | 384 | 39 | 2.30E-04 | ||
| Pfam | 358 | 405 | 48 | 1.60E-04 | ||
| ProSiteProfiles | 361 | 393 | 33 | 10.943 | ||
| ProSitePatterns | 371 | 385 | 15 | – | ||
| PRINTS | 371 | 385 | 15 | 1.80E-07 | ||
| SMART | 387 | 426 | 40 | 0.0049 | ||
| ProSiteProfiles | 394 | 435 | 42 | 9.539 | ||
| SMART | 429 | 472 | 44 | 0.39 | ||
| Pfam | 451 | 472 | 22 | 0.013 | ||
| ProSiteProfiles | 453 | 481 | 29 | 10.542 | ||
| SMART | 475 | 514 | 40 | 3.20E-06 | ||
| Pfam | 478 | 514 | 37 | 0.023 | ||
| ProSiteProfiles | 482 | 514 | 33 | 10.041 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1399990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1399990.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.