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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1539310 |
| Transcript ID | Lj4g3v1539310.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Disease resistance RPP8-like protein [Medicago truncatula] gi|357514005|ref|XP_003627291.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 6 | 29 | 24 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| PANTHER | 30 | 86 | 57 | 4.10E-121 | – | |
| Phobius | 30 | 111 | 82 | – | – | |
| PANTHER | 30 | 86 | 57 | 4.10E-121 | – | |
| Coils | 36 | 63 | 28 | – | – | |
| Phobius | 112 | 130 | 19 | – | – | |
| Phobius | 131 | 928 | 798 | – | – | |
| PANTHER | 248 | 267 | 20 | 4.10E-121 | – | |
| PANTHER | 248 | 267 | 20 | 4.10E-121 | – | |
| PANTHER | 283 | 326 | 44 | 4.10E-121 | – | |
| PANTHER | 283 | 326 | 44 | 4.10E-121 | – | |
| Coils | 354 | 374 | 21 | – | – | |
| Gene3D | 426 | 467 | 42 | 2.60E-04 | ||
| PANTHER | 427 | 759 | 333 | 4.10E-121 | – | |
| PANTHER | 427 | 759 | 333 | 4.10E-121 | – | |
| SUPERFAMILY | 428 | 682 | 255 | 1.77E-41 | ||
| Pfam | 440 | 710 | 271 | 6.30E-43 | ||
| PRINTS | 457 | 472 | 16 | 4.70E-14 | – | |
| Gene3D | 468 | 577 | 110 | 1.50E-06 | ||
| PRINTS | 524 | 538 | 15 | 4.70E-14 | – | |
| PRINTS | 621 | 635 | 15 | 4.70E-14 | – | |
| PANTHER | 800 | 994 | 195 | 4.10E-121 | – | |
| PANTHER | 800 | 994 | 195 | 4.10E-121 | – | |
| SUPERFAMILY | 831 | 1133 | 303 | 5.78E-29 | ||
| Gene3D | 834 | 909 | 76 | 2.90E-21 | ||
| PRINTS | 875 | 891 | 17 | 4.70E-14 | – | |
| Phobius | 929 | 946 | 18 | – | – | |
| Phobius | 947 | 1160 | 214 | – | – | |
| Gene3D | 966 | 1132 | 167 | 2.90E-21 | ||
| PANTHER | 1037 | 1121 | 85 | 4.10E-121 | – | |
| PANTHER | 1037 | 1121 | 85 | 4.10E-121 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj4g3v1539310.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1539310.1, powered by CORGI.
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