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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1604460 |
| Transcript ID | Lj4g3v1604460.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ATPase 11, plasma membrane-type-like isoform X3 [Cicer arietinum] gi|502152150|ref|XP_004508789.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 531 | 531 | 0 | – | |
| PANTHER | 1 | 531 | 531 | 0 | – | |
| TIGRFAM | 1 | 554 | 554 | 8.10E-241 | ||
| SUPERFAMILY | 5 | 67 | 63 | 7.98E-49 | – | |
| Pfam | 5 | 64 | 60 | 3.70E-08 | ||
| Phobius | 23 | 45 | 23 | – | – | |
| TMHMM | 23 | 45 | 23 | – | – | |
| Phobius | 46 | 390 | 345 | – | – | |
| Gene3D | 63 | 87 | 25 | 2.90E-07 | ||
| SUPERFAMILY | 69 | 125 | 57 | 1.37E-38 | ||
| Pfam | 69 | 346 | 278 | 4.10E-18 | – | |
| PRINTS | 73 | 87 | 15 | 3.40E-35 | – | |
| ProSitePatterns | 75 | 81 | 7 | – | ||
| Gene3D | 88 | 231 | 144 | 2.80E-32 | ||
| SUPERFAMILY | 152 | 379 | 228 | 1.37E-38 | ||
| PRINTS | 189 | 207 | 19 | 2.20E-59 | ||
| PRINTS | 227 | 238 | 12 | 3.40E-35 | – | |
| PRINTS | 249 | 259 | 11 | 3.40E-35 | – | |
| Gene3D | 297 | 593 | 297 | 1.50E-101 | ||
| PRINTS | 304 | 320 | 17 | 2.20E-59 | ||
| TIGRFAM | 307 | 420 | 114 | 4.00E-28 | ||
| PRINTS | 332 | 348 | 17 | 2.20E-59 | ||
| PRINTS | 332 | 351 | 20 | 3.40E-35 | – | |
| PRINTS | 355 | 367 | 13 | 3.40E-35 | – | |
| PRINTS | 363 | 388 | 26 | 2.20E-59 | ||
| SUPERFAMILY | 381 | 595 | 215 | 7.98E-49 | – | |
| TMHMM | 391 | 413 | 23 | – | – | |
| Phobius | 391 | 413 | 23 | – | – | |
| Phobius | 414 | 418 | 5 | – | – | |
| Phobius | 419 | 436 | 18 | – | – | |
| TMHMM | 420 | 437 | 18 | – | – | |
| Phobius | 437 | 455 | 19 | – | – | |
| TMHMM | 455 | 477 | 23 | – | – | |
| Phobius | 456 | 478 | 23 | – | – | |
| Phobius | 479 | 502 | 24 | – | – | |
| Phobius | 503 | 522 | 20 | – | – | |
| PRINTS | 508 | 529 | 22 | 2.20E-59 | ||
| Phobius | 523 | 533 | 11 | – | – | |
| TMHMM | 533 | 555 | 23 | – | – | |
| Phobius | 534 | 555 | 22 | – | – | |
| Phobius | 556 | 566 | 11 | – | – | |
| TMHMM | 565 | 584 | 20 | – | – | |
| Phobius | 567 | 584 | 18 | – | – | |
| PANTHER | 568 | 670 | 103 | 0 | – | |
| PANTHER | 568 | 670 | 103 | 0 | – | |
| Phobius | 585 | 697 | 113 | – | – | |
| Coils | 648 | 668 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of Lj4g3v1604460.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1604460.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.