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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1614700 |
| Transcript ID | Lj4g3v1614700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nitrate transporter 1.2-like [Glycine max] gi|356513553|ref|XP_003525477.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 4 | 198 | 195 | 5.50E-105 | ||
| PANTHER | 4 | 198 | 195 | 5.50E-105 | – | |
| Phobius | 4 | 12 | 9 | – | – | |
| Pfam | 4 | 172 | 169 | 1.40E-42 | ||
| Phobius | 13 | 24 | 12 | – | – | |
| Phobius | 25 | 39 | 15 | – | – | |
| Phobius | 40 | 57 | 18 | – | – | |
| Gene3D | 40 | 138 | 99 | 6.80E-06 | – | |
| TMHMM | 40 | 62 | 23 | – | – | |
| SUPERFAMILY | 41 | 138 | 98 | 3.92E-08 | ||
| Phobius | 58 | 82 | 25 | – | – | |
| Phobius | 83 | 105 | 23 | – | – | |
| TMHMM | 83 | 105 | 23 | – | – | |
| Phobius | 106 | 110 | 5 | – | – | |
| TMHMM | 110 | 132 | 23 | – | – | |
| Phobius | 111 | 132 | 22 | – | – | |
| Phobius | 133 | 199 | 67 | – | – | |
| MobiDBLite | 178 | 199 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1614700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1614700.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.