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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1823550 |
| Transcript ID | Lj4g3v1823550.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: potassium channel AKT1-like [Glycine max] gi|356563061|ref|XP_003549784.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 517 | 517 | 0 | – | |
| PANTHER | 1 | 517 | 517 | 0 | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 6 | 27 | 22 | – | – | |
| Phobius | 28 | 618 | 591 | – | – | |
| SUPERFAMILY | 31 | 224 | 194 | 1.27E-40 | ||
| Gene3D | 82 | 222 | 141 | 1.50E-23 | ||
| CDD | 106 | 211 | 106 | 4.79E-26 | – | |
| ProSiteProfiles | 106 | 208 | 103 | 23.251 | ||
| SMART | 106 | 223 | 118 | 1.60E-24 | ||
| Pfam | 126 | 210 | 85 | 3.80E-15 | ||
| SMART | 253 | 282 | 30 | 2300 | ||
| SUPERFAMILY | 258 | 437 | 180 | 1.27E-40 | ||
| Gene3D | 258 | 439 | 182 | 3.30E-45 | ||
| Pfam | 258 | 346 | 89 | 2.40E-11 | ||
| ProSiteProfiles | 258 | 433 | 176 | 38.276 | ||
| CDD | 281 | 433 | 153 | 1.58E-31 | – | |
| SMART | 286 | 315 | 30 | 1.50E-05 | ||
| ProSiteProfiles | 286 | 318 | 33 | 11.701 | ||
| SMART | 319 | 348 | 30 | 0.097 | ||
| ProSiteProfiles | 319 | 351 | 33 | 9.271 | ||
| Pfam | 358 | 433 | 76 | 4.90E-10 | ||
| SMART | 384 | 413 | 30 | 6.50E-07 | ||
| ProSiteProfiles | 384 | 416 | 33 | 15.227 | ||
| MobiDBLite | 466 | 495 | 30 | – | – | |
| ProSiteProfiles | 540 | 618 | 79 | 29.542 | ||
| Pfam | 540 | 602 | 63 | 1.20E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1823550.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1823550.3, powered by CORGI.
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