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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1881980 |
| Transcript ID | Lj4g3v1881980.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ENTH/ANTH/VHS superfamily protein isoform 1 [Theobroma cacao] gi|508783924|gb|EOY31180.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 542 | 540 | 7.20E-255 | – | |
| PANTHER | 3 | 542 | 540 | 7.20E-255 | – | |
| ProSiteProfiles | 24 | 162 | 139 | 33.248 | ||
| Gene3D | 29 | 158 | 130 | 5.30E-42 | ||
| SMART | 30 | 162 | 133 | 6.30E-38 | ||
| Pfam | 31 | 298 | 268 | 4.00E-87 | ||
| SUPERFAMILY | 31 | 163 | 133 | 3.36E-32 | ||
| CDD | 32 | 155 | 124 | 6.27E-38 | – | |
| SUPERFAMILY | 169 | 298 | 130 | 8.24E-41 | – | |
| Gene3D | 174 | 301 | 128 | 4.10E-45 | ||
| MobiDBLite | 329 | 360 | 32 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phospholipid binding | Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester. | ||
| Molecular function | 1-phosphatidylinositol binding | Interacting selectively and non-covalently with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol. | ||
| Cellular component | Clathrin-coated vesicle | A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. | ||
| Molecular function | Clathrin binding | Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles. | ||
| Biological process | Clathrin coat assembly | The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage. |
Expression pattern of Lj4g3v1881980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1881980.1, powered by CORGI.
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