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GO:0030136

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Clathrin-coated vesicle
Full defintion A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.
Subterm of

Relationships

The relationship of GO:0030136 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah
PMID
Three ways to make a vesicle.Kirchhausen T
Nat Rev Mol Cell Biol. 2000 Dec; 1 (3): 187–98.PMID: 11252894

Cargo molecules have to be included in carrier vesicles of different forms and sizes to be transported between organelles. During this process, a limited set of proteins, including the coat proteins COPI, COPII and clathrin, carries out a programmed set of sequential interactions that lead to the budding of vesicles. A general model to explain the formation of coated vesicles is starting to emerge but the picture is more complex than we had imagined.

Associated Lotus transcripts 28

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0158279.1
– Epsin N-terminal homology (ENTH) domain-containing protein [Medicago truncatula] gi|357466187|ref|XP_003603378.1|
GO terms
4
Lj1g3v1889550.1
– Epsin N-terminal domain-containing protein / clathrin assembly protein-related isoform 1 [Theobroma cacao] gi|508782208|gb|EOY29464.1|
GO terms
4
Lj2g3v0521150.1
–
GO terms
4
Lj4g3v0336790.1
– ENTH/ANTH/VHS superfamily protein [Theobroma cacao] gi|508706974|gb|EOX98870.1|
GO terms
4
Lj4g3v1881390.1
– Epsin N-terminal homology (ENTH) domain-containing protein [Medicago truncatula] gi|357478179|ref|XP_003609375.1|
GO terms
4
Lj4g3v1881980.1
– ENTH/ANTH/VHS superfamily protein isoform 1 [Theobroma cacao] gi|508783924|gb|EOY31180.1|
GO terms
4
Lj4g3v2137090.1
– Phosphoprotein-like protein [Medicago truncatula] gi|357479541|ref|XP_003610056.1|
GO terms
4
Lj4g3v2401050.1
– ENTH/VHS/GAT family protein [Arabidopsis thaliana] gi|15222535|ref|NP_173895.1|
GO terms
4
Lj4g3v2434830.1
– ENTH/ANTH/VHS superfamily protein [Theobroma cacao] gi|508709143|gb|EOY01040.1|
GO terms
4
Lj6g3v2221960.1
– ENTH/ANTH/VHS superfamily protein [Theobroma cacao] gi|508706974|gb|EOX98870.1|
GO terms
4
LotjaGi1g1v0382900.1
– Clathrin assembly family protein; TAIR: AT2G25430.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein; Swiss-Prot: sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430; TrEMBL-Plants: tr|A0A151RLK9|A0A151RLK9_CAJCA Putative clathrin assembly protein family; Found in the gene: LotjaGi1g1v0382900
GO terms
4
LotjaGi1g1v0382900.2
– Clathrin assembly family protein; TAIR: AT2G25430.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein; Swiss-Prot: sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430; TrEMBL-Plants: tr|A0A151RLK9|A0A151RLK9_CAJCA Putative clathrin assembly protein family; Found in the gene: LotjaGi1g1v0382900
GO terms
4
LotjaGi1g1v0382900.3
– Clathrin assembly family protein; TAIR: AT2G25430.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein; Swiss-Prot: sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430; TrEMBL-Plants: tr|A0A151RLK9|A0A151RLK9_CAJCA Putative clathrin assembly protein family; Found in the gene: LotjaGi1g1v0382900
GO terms
4
LotjaGi2g1v0007300.1
– ENTH/ANTH/VHS superfamily protein; TAIR: AT1G25240.1 ENTH/VHS/GAT family protein; Swiss-Prot: sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240; TrEMBL-Plants: tr|A0A151R3S9|A0A151R3S9_CAJCA Putative clathrin assembly protein family; Found in the gene: LotjaGi2g1v0007300
GO terms
4
LotjaGi4g1v0032300.1
– Clathrin assembly family protein; TAIR: AT1G03050.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050; TrEMBL-Plants: tr|A0A1J7IJM8|A0A1J7IJM8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0032300
GO terms
4
LotjaGi4g1v0273600.1
– Clathrin assembly family protein; TAIR: AT2G25430.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein; Swiss-Prot: sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430; TrEMBL-Plants: tr|I1LZP6|I1LZP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0273600
GO terms
4
LotjaGi4g1v0275800.1
– ENTH/ANTH/VHS superfamily protein; TAIR: AT5G35200.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200; TrEMBL-Plants: tr|I3SKY7|I3SKY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0275800
GO terms
4
LotjaGi4g1v0275800.2
– ENTH/ANTH/VHS superfamily protein; TAIR: AT5G35200.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200; TrEMBL-Plants: tr|I3SKY7|I3SKY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0275800
GO terms
4
LotjaGi4g1v0275800.3
– ENTH/ANTH/VHS superfamily protein; TAIR: AT5G35200.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200; TrEMBL-Plants: tr|I3SKY7|I3SKY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0275800
GO terms
4
LotjaGi4g1v0305400.1
– ENTH/ANTH/VHS superfamily protein; TAIR: AT4G25940.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940; TrEMBL-Plants: tr|I1LVM2|I1LVM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0305400
GO terms
4
LotjaGi4g1v0354300.1
– ENTH/ANTH/VHS superfamily protein; TAIR: AT1G25240.1 ENTH/VHS/GAT family protein; Swiss-Prot: sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240; TrEMBL-Plants: tr|I1K3B5|I1K3B5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0354300
GO terms
4
LotjaGi4g1v0358800.1
– ENTH/ANTH/VHS superfamily protein; TAIR: AT2G01600.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600; TrEMBL-Plants: tr|A0A151T2E9|A0A151T2E9_CAJCA Putative clathrin assembly protein family; Found in the gene: LotjaGi4g1v0358800
GO terms
4
LotjaGi6g1v0022100.1
– Clathrin assembly protein; TAIR: AT1G05020.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180; TrEMBL-Plants: tr|K7LYR1|K7LYR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0022100
GO terms
4
LotjaGi6g1v0022100.2
– Clathrin assembly protein; TAIR: AT1G05020.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180; TrEMBL-Plants: tr|K7LYR1|K7LYR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0022100
GO terms
4
LotjaGi6g1v0199000.1
– ENTH/ANTH/VHS superfamily protein; TAIR: AT5G35200.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200; TrEMBL-Plants: tr|A0A072TEL9|A0A072TEL9_MEDTR Clathrin assembly protein; Found in the gene: LotjaGi6g1v0199000
GO terms
4
LotjaGi6g1v0235700.1
– ENTH/ANTH/VHS superfamily protein; TAIR: AT4G25940.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940; TrEMBL-Plants: tr|A0A151T5F7|A0A151T5F7_CAJCA Putative clathrin assembly protein family; Found in the gene: LotjaGi6g1v0235700
GO terms
4
LotjaGi6g1v0355400.1
– Clathrin assembly family protein; TAIR: AT1G03050.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050; TrEMBL-Plants: tr|A0A1J7GTW2|A0A1J7GTW2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0355400
GO terms
4
LotjaGi6g1v0355400.2
– Clathrin assembly family protein; TAIR: AT1G03050.1 ENTH/ANTH/VHS superfamily protein; Swiss-Prot: sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050; TrEMBL-Plants: tr|A0A1J7GTW2|A0A1J7GTW2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0355400
GO terms
4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0048268
Biological process Clathrin coat assembly 1 3.57