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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1920950 |
| Transcript ID | Lj4g3v1920950.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: translocase of chloroplast 90, chloroplastic-like [Glycine max] gi|356546132|ref|XP_003541485.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 765 | 765 | – | – | |
| MobiDBLite | 46 | 70 | 25 | – | – | |
| PANTHER | 65 | 792 | 728 | 0 | – | |
| PANTHER | 65 | 792 | 728 | 0 | – | |
| TIGRFAM | 76 | 782 | 707 | 5.10E-213 | ||
| Gene3D | 149 | 395 | 247 | 4.80E-57 | ||
| SUPERFAMILY | 170 | 361 | 192 | 2.28E-20 | ||
| ProSiteProfiles | 172 | 402 | 231 | 45.125 | ||
| Pfam | 175 | 327 | 153 | 1.70E-22 | ||
| Coils | 486 | 506 | 21 | – | – | |
| Pfam | 519 | 784 | 266 | 1.30E-119 | ||
| Phobius | 766 | 782 | 17 | – | – | |
| Phobius | 783 | 799 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Molecular function | Hydrolase activity, acting on acid anhydrides | Catalysis of the hydrolysis of any acid anhydride. |
Expression pattern of Lj4g3v1920950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1920950.1, powered by CORGI.
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