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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2139970 |
| Transcript ID | Lj4g3v2139970.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PIN2a [Glycine max] gi|481044558|gb|AGJ95061.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| TIGRFAM | 1 | 639 | 639 | 4.50E-162 | ||
| PANTHER | 2 | 269 | 268 | 0 | – | |
| PANTHER | 2 | 269 | 268 | 0 | – | |
| TMHMM | 10 | 28 | 19 | – | – | |
| Pfam | 10 | 635 | 626 | 8.70E-181 | ||
| Phobius | 12 | 30 | 19 | – | – | |
| Phobius | 31 | 41 | 11 | – | – | |
| TMHMM | 40 | 59 | 20 | – | – | |
| Phobius | 42 | 59 | 18 | – | – | |
| Phobius | 60 | 70 | 11 | – | – | |
| TMHMM | 69 | 91 | 23 | – | – | |
| Phobius | 71 | 89 | 19 | – | – | |
| Phobius | 90 | 100 | 11 | – | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 101 | 120 | 20 | – | – | |
| Phobius | 121 | 131 | 11 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| Phobius | 132 | 152 | 21 | – | – | |
| Phobius | 153 | 495 | 343 | – | – | |
| PANTHER | 293 | 310 | 18 | 0 | – | |
| PANTHER | 293 | 310 | 18 | 0 | – | |
| MobiDBLite | 312 | 368 | 57 | – | – | |
| PANTHER | 367 | 400 | 34 | 0 | – | |
| PANTHER | 367 | 400 | 34 | 0 | – | |
| PANTHER | 429 | 640 | 212 | 0 | – | |
| PANTHER | 429 | 640 | 212 | 0 | – | |
| Phobius | 496 | 513 | 18 | – | – | |
| Phobius | 514 | 524 | 11 | – | – | |
| TMHMM | 523 | 545 | 23 | – | – | |
| Phobius | 525 | 546 | 22 | – | – | |
| Phobius | 547 | 557 | 11 | – | – | |
| Phobius | 558 | 580 | 23 | – | – | |
| TMHMM | 560 | 582 | 23 | – | – | |
| Phobius | 581 | 585 | 5 | – | – | |
| TMHMM | 584 | 606 | 23 | – | – | |
| Phobius | 586 | 606 | 21 | – | – | |
| Phobius | 607 | 617 | 11 | – | – | |
| TMHMM | 616 | 638 | 23 | – | – | |
| Phobius | 618 | 637 | 20 | – | – | |
| Phobius | 638 | 640 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2139970.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2139970.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.