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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2286040 |
| Transcript ID | Lj4g3v2286040.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: COBRA-like protein 7-like [Glycine max] gi|356521813|ref|XP_003529545.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| PANTHER | 1 | 644 | 644 | 0 | – | |
| PANTHER | 1 | 644 | 644 | 0 | – | |
| Phobius | 1 | 29 | 29 | – | – | |
| ProSiteProfiles | 1 | 32 | 32 | 6 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 9 | 21 | 13 | – | – | |
| Phobius | 22 | 29 | 8 | – | – | |
| Phobius | 30 | 625 | 596 | – | – | |
| ProDom | 198 | 397 | 200 | 1.00E-83 | ||
| Pfam | 221 | 400 | 180 | 2.60E-57 | ||
| Phobius | 626 | 643 | 18 | – | – | |
| Phobius | 644 | 644 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellulose microfibril organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cellulose microfibril, any of the cellulose structures laid down in orthogonal layers in a plant cell wall. | ||
| Cellular component | Anchored component of membrane | The component of a membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping. |
Expression pattern of Lj4g3v2286040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2286040.1, powered by CORGI.
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