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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2370470 |
| Transcript ID | Lj4g3v2370470.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Cicer arietinum] gi|502151137|ref|XP_004508296.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 56 | 573 | 518 | 0 | – | |
| PANTHER | 56 | 573 | 518 | 0 | – | |
| ProSiteProfiles | 68 | 102 | 35 | 10.983 | ||
| SUPERFAMILY | 69 | 291 | 223 | 2.84E-06 | ||
| TIGRFAM | 70 | 103 | 34 | 6.90E-06 | ||
| Pfam | 70 | 100 | 31 | 2.10E-04 | ||
| Gene3D | 77 | 278 | 202 | 1.30E-08 | ||
| ProSiteProfiles | 138 | 168 | 31 | 7.848 | ||
| TIGRFAM | 141 | 170 | 30 | 1.60E-04 | ||
| Pfam | 143 | 170 | 28 | 7.10E-04 | ||
| ProSiteProfiles | 169 | 199 | 31 | 10.633 | ||
| Pfam | 171 | 199 | 29 | 8.30E-07 | ||
| TIGRFAM | 171 | 196 | 26 | 2.40E-04 | ||
| ProSiteProfiles | 200 | 234 | 35 | 12.671 | ||
| TIGRFAM | 202 | 232 | 31 | 6.70E-08 | ||
| Pfam | 202 | 231 | 30 | 1.60E-09 | ||
| TIGRFAM | 234 | 262 | 29 | 2.60E-04 | ||
| Pfam | 234 | 262 | 29 | 1.90E-04 | ||
| ProSiteProfiles | 235 | 261 | 27 | 6.248 | ||
| ProSiteProfiles | 262 | 292 | 31 | 9.898 | ||
| TIGRFAM | 268 | 293 | 26 | 8.20E-06 | ||
| SUPERFAMILY | 273 | 317 | 45 | 1.02E-07 | ||
| Gene3D | 279 | 427 | 149 | 3.80E-11 | ||
| Pfam | 293 | 341 | 49 | 3.30E-09 | ||
| ProSiteProfiles | 293 | 327 | 35 | 10.72 | ||
| TIGRFAM | 296 | 322 | 27 | 3.70E-06 | ||
| ProSiteProfiles | 330 | 364 | 35 | 6.336 | ||
| ProSiteProfiles | 365 | 395 | 31 | 8.013 | ||
| TIGRFAM | 370 | 398 | 29 | 0.0013 | ||
| ProSiteProfiles | 396 | 430 | 35 | 11.224 | ||
| Pfam | 396 | 442 | 47 | 1.40E-09 | ||
| TIGRFAM | 398 | 431 | 34 | 2.20E-06 | ||
| SUPERFAMILY | 411 | 448 | 38 | 1.02E-07 | ||
| ProSiteProfiles | 431 | 465 | 35 | 10.83 | ||
| TIGRFAM | 433 | 465 | 33 | 8.80E-04 | ||
| ProSiteProfiles | 466 | 496 | 31 | 6.522 | ||
| Pfam | 469 | 493 | 25 | 0.019 | ||
| Gene3D | 496 | 554 | 59 | 3.80E-11 | ||
| SUPERFAMILY | 505 | 554 | 50 | 1.02E-07 | ||
| ProSiteProfiles | 532 | 566 | 35 | 6.533 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2370470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2370470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.