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Lj4g3v2400830.1

Overview

Field Value
Gene ID Lj4g3v2400830
Transcript ID Lj4g3v2400830.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: NEDD8-activating enzyme E1 catalytic subunit-like [Cicer arietinum] gi|502149911|ref|XP_004507708.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10953
1 370 370 3.70E-205 –
PANTHER
PTHR10953:SF6
1 370 370 3.70E-205
IPR030468
Pfam
PF00899
34 335 302 8.50E-69
IPR000594
Gene3D
G3DSA:3.40.50.720
43 210 168 1.60E-66
IPR016040
SUPERFAMILY
SSF69572
43 365 323 3.79E-100
IPR000594
CDD
cd01488
44 339 296 0 –
ProSitePatterns
PS00865
209 217 9 –
IPR033127
Gene3D
G3DSA:1.10.10.520
211 280 70 4.90E-22
IPR023318
Gene3D
G3DSA:3.40.50.720
282 336 55 1.60E-66
IPR016040
Gene3D
G3DSA:3.10.20.260
337 369 33 1.10E-05
IPR014929

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008641
Molecular function Ubiquitin-like modifier activating enzyme activity Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond.
Subterm of
GO:0019781
Molecular function NEDD8 activating enzyme activity Catalysis of the initiation of the NEDD8 (RUB1) conjugation cascade.
Subterm of
GO:0045116
Biological process Protein neddylation Covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to another protein.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj4g3v2400830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2400830.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.