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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2575050 |
| Transcript ID | Lj4g3v2575050.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: 70 kDa peptidyl-prolyl isomerase-like [Glycine max] gi|356528282|ref|XP_003532733.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 148 | 148 | 3.40E-144 | ||
| PANTHER | 1 | 148 | 148 | 3.40E-144 | – | |
| Gene3D | 1 | 46 | 46 | 1.00E-09 | – | |
| SUPERFAMILY | 1 | 49 | 49 | 6.68E-08 | – | |
| ProSiteProfiles | 1 | 47 | 47 | 13.276 | ||
| SUPERFAMILY | 50 | 184 | 135 | 8.45E-34 | – | |
| Gene3D | 51 | 188 | 138 | 5.60E-39 | – | |
| Pfam | 69 | 164 | 96 | 5.80E-24 | ||
| ProSiteProfiles | 75 | 167 | 93 | 23.217 | ||
| SUPERFAMILY | 180 | 333 | 154 | 3.54E-31 | ||
| PANTHER | 184 | 353 | 170 | 3.40E-144 | – | |
| PANTHER | 184 | 353 | 170 | 3.40E-144 | ||
| ProSiteProfiles | 184 | 217 | 34 | 7.913 | ||
| SMART | 184 | 217 | 34 | 15 | ||
| ProSiteProfiles | 184 | 217 | 34 | 7.729 | ||
| Gene3D | 189 | 319 | 131 | 2.00E-30 | ||
| ProSiteProfiles | 233 | 300 | 68 | 14.347 | ||
| SMART | 233 | 266 | 34 | 0.037 | ||
| ProSiteProfiles | 233 | 266 | 34 | 5.576 | ||
| ProSiteProfiles | 267 | 300 | 34 | 9.617 | ||
| SMART | 267 | 300 | 34 | 5.60E-05 | ||
| Pfam | 268 | 300 | 33 | 3.80E-04 | ||
| Coils | 300 | 320 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2575050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2575050.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.