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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2578300 |
| Transcript ID | Lj4g3v2578300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: subtilisin-like protease SDD1-like [Glycine max] gi|356510921|ref|XP_003524182.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| PANTHER | 1 | 778 | 778 | 0 | – | |
| PANTHER | 1 | 778 | 778 | 0 | ||
| Phobius | 14 | 25 | 12 | – | – | |
| Phobius | 26 | 32 | 7 | – | – | |
| Phobius | 33 | 779 | 747 | – | – | |
| Pfam | 42 | 121 | 80 | 3.20E-18 | ||
| SUPERFAMILY | 44 | 187 | 144 | 6.68E-79 | ||
| Gene3D | 74 | 121 | 48 | 1.00E-04 | ||
| CDD | 118 | 596 | 479 | 5.95E-139 | – | |
| Gene3D | 137 | 362 | 226 | 7.90E-76 | ||
| Pfam | 146 | 606 | 461 | 2.90E-49 | ||
| PRINTS | 146 | 165 | 20 | 6.30E-16 | ||
| SUPERFAMILY | 219 | 361 | 143 | 6.68E-79 | ||
| PRINTS | 227 | 240 | 14 | 6.30E-16 | ||
| CDD | 371 | 498 | 128 | 6.58E-30 | – | |
| SUPERFAMILY | 508 | 658 | 151 | 6.68E-79 | ||
| Gene3D | 509 | 645 | 137 | 7.90E-76 | ||
| PRINTS | 559 | 575 | 17 | 6.30E-16 | ||
| ProSitePatterns | 560 | 570 | 11 | – | ||
| Coils | 779 | 779 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj4g3v2578300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2578300.2, powered by CORGI.
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