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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2604040 |
| Transcript ID | Lj4g3v2604040.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Glycine max] gi|356525258|ref|XP_003531243.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| PANTHER | 20 | 433 | 414 | 1.70E-289 | – | |
| PANTHER | 20 | 433 | 414 | 1.70E-289 | – | |
| Phobius | 24 | 472 | 449 | – | – | |
| SUPERFAMILY | 26 | 346 | 321 | 1.29E-78 | ||
| Gene3D | 26 | 347 | 322 | 6.40E-108 | ||
| Pfam | 26 | 347 | 322 | 6.80E-80 | ||
| ProSitePatterns | 260 | 273 | 14 | – | ||
| SMART | 360 | 445 | 86 | 2.30E-47 | ||
| Pfam | 361 | 431 | 71 | 3.00E-20 | ||
| Phobius | 473 | 493 | 21 | – | – | |
| TMHMM | 475 | 492 | 18 | – | – | |
| Phobius | 494 | 494 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj4g3v2604040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2604040.1, powered by CORGI.
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