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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2690760 |
| Transcript ID | Lj4g3v2690760.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transmembrane 9 superfamily member 3-like [Cicer arietinum] gi|502140364|ref|XP_004504187.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| PANTHER | 1 | 402 | 402 | 5.10E-292 | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| PANTHER | 1 | 402 | 402 | 5.10E-292 | ||
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 223 | 199 | – | – | |
| Pfam | 54 | 400 | 347 | 7.60E-100 | ||
| Phobius | 224 | 246 | 23 | – | – | |
| TMHMM | 224 | 246 | 23 | – | – | |
| Phobius | 247 | 289 | 43 | – | – | |
| Phobius | 290 | 320 | 31 | – | – | |
| TMHMM | 293 | 315 | 23 | – | – | |
| Phobius | 321 | 325 | 5 | – | – | |
| TMHMM | 325 | 347 | 23 | – | – | |
| Phobius | 326 | 345 | 20 | – | – | |
| Phobius | 346 | 356 | 11 | – | – | |
| Phobius | 357 | 377 | 21 | – | – | |
| TMHMM | 368 | 390 | 23 | – | – | |
| Phobius | 378 | 382 | 5 | – | – | |
| Phobius | 383 | 401 | 19 | – | – | |
| Phobius | 402 | 402 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj4g3v2690760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2690760.1, powered by CORGI.
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