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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2804810 |
| Transcript ID | Lj4g3v2804810.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | U-box domain-containing protein [Medicago truncatula] gi|357519575|ref|XP_003630076.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| Gene3D | 5 | 246 | 242 | 3.60E-32 | ||
| Phobius | 12 | 22 | 11 | – | – | |
| Phobius | 23 | 30 | 8 | – | – | |
| Phobius | 31 | 917 | 887 | – | – | |
| SUPERFAMILY | 37 | 67 | 31 | 1.13E-36 | ||
| PANTHER | 120 | 155 | 36 | 0 | – | |
| PANTHER | 120 | 155 | 36 | 0 | – | |
| SUPERFAMILY | 122 | 505 | 384 | 1.13E-36 | ||
| ProSiteProfiles | 132 | 176 | 45 | 8.732 | ||
| SMART | 165 | 206 | 42 | 42 | ||
| PANTHER | 183 | 902 | 720 | 0 | – | |
| PANTHER | 183 | 902 | 720 | 0 | – | |
| SMART | 248 | 288 | 41 | 370 | ||
| Gene3D | 251 | 626 | 376 | 2.50E-41 | ||
| CDD | 262 | 373 | 112 | 0.00293542 | – | |
| SMART | 334 | 374 | 41 | 29 | ||
| CDD | 344 | 456 | 113 | 3.79E-07 | – | |
| SMART | 375 | 415 | 41 | 57 | ||
| SMART | 417 | 457 | 41 | 63 | ||
| SMART | 505 | 543 | 39 | 260 | ||
| SUPERFAMILY | 516 | 883 | 368 | 2.98E-33 | ||
| Gene3D | 638 | 903 | 266 | 1.70E-24 | ||
| CDD | 638 | 722 | 85 | 4.59E-04 | – | |
| SMART | 666 | 705 | 40 | 9.3 | ||
| CDD | 762 | 831 | 70 | 0.00280123 | – | |
| SMART | 793 | 833 | 41 | 9.9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2804810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2804810.1, powered by CORGI.
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