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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2825680 |
| Transcript ID | Lj4g3v2825680.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max] gi|356527520|ref|XP_003532357.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 149 | 149 | – | – | |
| MobiDBLite | 324 | 355 | 32 | – | – | |
| PANTHER | 350 | 717 | 368 | 0 | – | |
| PANTHER | 350 | 717 | 368 | 0 | – | |
| SUPERFAMILY | 379 | 626 | 248 | 9.15E-54 | ||
| SMART | 385 | 587 | 203 | 5.90E-26 | ||
| Gene3D | 388 | 573 | 186 | 1.10E-19 | ||
| ProSiteProfiles | 402 | 576 | 175 | 18.865 | ||
| Pfam | 405 | 671 | 267 | 1.20E-48 | ||
| CDD | 409 | 558 | 150 | 3.72E-17 | – | |
| SUPERFAMILY | 641 | 917 | 277 | 3.84E-56 | ||
| PANTHER | 736 | 921 | 186 | 0 | – | |
| PANTHER | 736 | 921 | 186 | 0 | – | |
| Gene3D | 741 | 885 | 145 | 7.30E-23 | ||
| CDD | 744 | 866 | 123 | 1.44E-24 | – | |
| Pfam | 746 | 858 | 113 | 7.80E-18 | ||
| ProSiteProfiles | 749 | 908 | 160 | 15.981 | ||
| SMART | 775 | 858 | 84 | 2.40E-20 | ||
| MobiDBLite | 967 | 993 | 27 | – | – | |
| MobiDBLite | 1008 | 1029 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj4g3v2825680.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2825680.1, powered by CORGI.
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