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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2991190 |
| Transcript ID | Lj4g3v2991190.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | transducin family protein [Arabidopsis lyrata subsp]. lyrata] gi|297809371|ref|XP_002872569.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 18 | 18 | – | – | |
| Phobius | 5 | 13 | 9 | – | – | |
| Phobius | 14 | 18 | 5 | – | – | |
| PANTHER | 15 | 91 | 77 | 1.20E-89 | – | |
| SMART | 15 | 65 | 51 | 140 | ||
| PANTHER | 15 | 91 | 77 | 1.20E-89 | – | |
| Phobius | 19 | 574 | 556 | – | – | |
| Gene3D | 50 | 79 | 30 | 7.10E-15 | ||
| SUPERFAMILY | 50 | 74 | 25 | 2.01E-11 | ||
| SUPERFAMILY | 52 | 143 | 92 | 2.93E-07 | ||
| SUPERFAMILY | 213 | 261 | 49 | 2.93E-07 | ||
| SUPERFAMILY | 291 | 305 | 15 | 2.93E-07 | ||
| SUPERFAMILY | 340 | 389 | 50 | 2.93E-07 | ||
| PANTHER | 430 | 563 | 134 | 1.20E-89 | – | |
| PANTHER | 430 | 563 | 134 | 1.20E-89 | – | |
| SUPERFAMILY | 457 | 560 | 104 | 2.01E-11 | ||
| Gene3D | 482 | 558 | 77 | 7.10E-15 | ||
| SMART | 488 | 536 | 49 | 8.10E-05 | ||
| SUPERFAMILY | 494 | 557 | 64 | 2.93E-07 | ||
| ProSiteProfiles | 495 | 545 | 51 | 9.494 | ||
| Pfam | 495 | 536 | 42 | 5.30E-04 | ||
| ProSiteProfiles | 523 | 545 | 23 | 10.475 | ||
| ProSitePatterns | 523 | 537 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2991190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2991190.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.