Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj4g3v3016320.1

Overview

Field Value
Gene ID Lj4g3v3016320
Transcript ID Lj4g3v3016320.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description protein kinase family protein [Glycine max] gi|351724979|ref|NP_001235029.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
136 152 17 8.10E-268 –
PANTHER
PTHR27001:SF7
136 152 17 8.10E-268 –
MobiDBLite
mobidb-lite
197 245 49 – –
PANTHER
PTHR27001
369 680 312 8.10E-268 –
PANTHER
PTHR27001:SF7
369 680 312 8.10E-268 –
SUPERFAMILY
SSF56112
384 675 292 1.50E-77
IPR011009
Gene3D
G3DSA:2.60.120.200
386 418 33 3.30E-06
IPR013320
ProSiteProfiles
PS50011
404 680 277 35.75
IPR000719
SMART
SM00219
404 674 271 8.90E-26
IPR020635
Pfam
PF00069
406 672 267 2.50E-41
IPR000719
CDD
cd14066
410 676 267 3.75E-96 –
Gene3D
G3DSA:3.30.200.20
419 465 47 4.70E-23 –
Gene3D
G3DSA:1.10.510.10
466 673 208 1.20E-40 –
ProSitePatterns
PS00109
525 537 13 –
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 22

Expression data

Expression pattern

Expression pattern of Lj4g3v3016320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v3016320.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.