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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3061500 |
| Transcript ID | Lj4g3v3061500.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide transporter At1g52190-like [Cicer arietinum] gi|502139576|ref|XP_004503821.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | – | – | |
| PANTHER | 3 | 542 | 540 | 0 | ||
| PANTHER | 3 | 542 | 540 | 0 | – | |
| Phobius | 26 | 48 | 23 | – | – | |
| TMHMM | 26 | 48 | 23 | – | – | |
| SUPERFAMILY | 28 | 202 | 175 | 8.63E-16 | ||
| ProSitePatterns | 46 | 70 | 25 | – | ||
| Phobius | 49 | 59 | 11 | – | – | |
| Pfam | 57 | 483 | 427 | 3.00E-82 | ||
| TMHMM | 58 | 80 | 23 | – | – | |
| Phobius | 60 | 80 | 21 | – | – | |
| Phobius | 81 | 100 | 20 | – | – | |
| Phobius | 101 | 127 | 27 | – | – | |
| TMHMM | 101 | 118 | 18 | – | – | |
| Phobius | 128 | 146 | 19 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 147 | 167 | 21 | – | – | |
| Phobius | 168 | 173 | 6 | – | – | |
| TMHMM | 174 | 196 | 23 | – | – | |
| Phobius | 174 | 199 | 26 | – | – | |
| Phobius | 200 | 294 | 95 | – | – | |
| SUPERFAMILY | 279 | 515 | 237 | 8.63E-16 | ||
| TMHMM | 292 | 314 | 23 | – | – | |
| Phobius | 295 | 314 | 20 | – | – | |
| Phobius | 315 | 325 | 11 | – | – | |
| TMHMM | 326 | 348 | 23 | – | – | |
| Phobius | 326 | 348 | 23 | – | – | |
| Phobius | 349 | 367 | 19 | – | – | |
| Phobius | 368 | 387 | 20 | – | – | |
| TMHMM | 368 | 387 | 20 | – | – | |
| Phobius | 388 | 406 | 19 | – | – | |
| Phobius | 407 | 428 | 22 | – | – | |
| Phobius | 429 | 447 | 19 | – | – | |
| TMHMM | 446 | 468 | 23 | – | – | |
| Phobius | 448 | 471 | 24 | – | – | |
| Phobius | 472 | 494 | 23 | – | – | |
| TMHMM | 495 | 517 | 23 | – | – | |
| Phobius | 495 | 518 | 24 | – | – | |
| Phobius | 519 | 544 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v3061500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3061500.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.