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Lj5g3v0412360.1

Overview

Field Value
Gene ID Lj5g3v0412360
Transcript ID Lj5g3v0412360.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356527242|ref|XP_003532221.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10285:SF75
30 388 359 8.70E-238
IPR029930
PANTHER
PTHR10285
30 388 359 8.70E-238 –
SUPERFAMILY
SSF52540
36 238 203 1.02E-43
IPR027417
TIGRFAM
TIGR00235
45 245 201 6.80E-71
IPR000764
Gene3D
G3DSA:3.40.50.300
46 245 200 1.20E-73
IPR027417
PRINTS
PR00988
47 64 18 1.20E-28
IPR000764
CDD
cd02023
49 245 197 1.34E-103 –
Pfam
PF00485
49 233 185 1.10E-44
IPR006083
PRINTS
PR00988
77 88 12 1.20E-28
IPR000764
PRINTS
PR00988
122 137 16 1.20E-28
IPR000764
PRINTS
PR00988
177 187 11 1.20E-28
IPR000764
PRINTS
PR00988
191 202 12 1.20E-28
IPR000764
PRINTS
PR00988
213 226 14 1.20E-28
IPR000764
Gene3D
G3DSA:3.40.50.2020
246 388 143 3.50E-60
IPR029057
SUPERFAMILY
SSF53271
248 388 141 2.41E-31
IPR029057
Pfam
PF14681
263 388 126 3.80E-38
IPR029057
CDD
cd06223
322 388 67 6.10E-04
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of

Genome browser

LORE1 insertions 36

Expression data

Expression pattern

Expression pattern of Lj5g3v0412360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0412360.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.