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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0469120 |
| Transcript ID | Lj5g3v0469120.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: G-protein coupled receptor 1-like [Glycine max] gi|356563948|ref|XP_003550219.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 168 | 168 | 2.40E-41 | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 168 | 168 | 2.40E-41 | – | |
| ProSiteProfiles | 1 | 152 | 152 | 12.731 | ||
| Phobius | 4 | 15 | 12 | – | – | |
| SUPERFAMILY | 4 | 169 | 166 | 6.23E-05 | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Phobius | 21 | 43 | 23 | – | – | |
| TMHMM | 43 | 65 | 23 | – | – | |
| Phobius | 44 | 64 | 21 | – | – | |
| Phobius | 65 | 96 | 32 | – | – | |
| Phobius | 97 | 114 | 18 | – | – | |
| TMHMM | 97 | 116 | 20 | – | – | |
| PRINTS | 100 | 118 | 19 | 7.90E-19 | ||
| Phobius | 115 | 125 | 11 | – | – | |
| TMHMM | 126 | 148 | 23 | – | – | |
| Phobius | 126 | 148 | 23 | – | – | |
| PRINTS | 132 | 151 | 20 | 7.90E-19 | ||
| Phobius | 149 | 198 | 50 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane signaling receptor activity | Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction. | ||
| Biological process | Cell surface receptor signaling pathway | A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v0469120.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0469120.2, powered by CORGI.
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