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Lj5g3v0550180.1

Overview

Field Value
Gene ID Lj5g3v0550180
Transcript ID Lj5g3v0550180.1
Lotus japonicus genome version MG20 v3.0
Description Electron carrier/ electron transporter/ iron ion binding protein [Medicago truncatula] gi|357436821|ref|XP_003588686.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23426:SF32
1 160 160 2.00E-61 –
PANTHER
PTHR23426
1 160 160 2.00E-61 –
Gene3D
G3DSA:3.10.20.30
66 144 79 1.30E-17
IPR012675
SUPERFAMILY
SSF54292
73 143 71 3.77E-15
IPR001041
Pfam
PF00111
92 141 50 4.50E-10
IPR001041

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009055
Molecular function Electron transfer activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
Subterm of
GO:0051536
Molecular function Iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj5g3v0550180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0550180.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.