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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0615360 |
| Transcript ID | Lj5g3v0615360.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein GPR107-like [Cicer arietinum] gi|502114546|ref|XP_004494982.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| TMHMM | 4 | 26 | 23 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| PANTHER | 19 | 439 | 421 | 4.90E-222 | ||
| Phobius | 19 | 24 | 6 | – | – | |
| PANTHER | 19 | 439 | 421 | 4.90E-222 | – | |
| Phobius | 25 | 177 | 153 | – | – | |
| Pfam | 135 | 416 | 282 | 7.40E-50 | ||
| TMHMM | 175 | 197 | 23 | – | – | |
| Phobius | 178 | 198 | 21 | – | – | |
| Phobius | 199 | 206 | 8 | – | – | |
| TMHMM | 207 | 224 | 18 | – | – | |
| Phobius | 207 | 223 | 17 | – | – | |
| Phobius | 224 | 242 | 19 | – | – | |
| Phobius | 243 | 269 | 27 | – | – | |
| TMHMM | 244 | 266 | 23 | – | – | |
| Phobius | 270 | 280 | 11 | – | – | |
| TMHMM | 281 | 300 | 20 | – | – | |
| Phobius | 281 | 300 | 20 | – | – | |
| Phobius | 301 | 311 | 11 | – | – | |
| Phobius | 312 | 335 | 24 | – | – | |
| TMHMM | 313 | 335 | 23 | – | – | |
| Phobius | 336 | 355 | 20 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 356 | 377 | 22 | – | – | |
| Phobius | 378 | 388 | 11 | – | – | |
| TMHMM | 389 | 411 | 23 | – | – | |
| Phobius | 389 | 410 | 22 | – | – | |
| Phobius | 411 | 440 | 30 | – | – | |
| Coils | 421 | 440 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v0615360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0615360.1, powered by CORGI.
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