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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0626520 |
| Transcript ID | Lj5g3v0626520.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: importin subunit alpha-2-like [Cicer arietinum] gi|502121877|ref|XP_004497474.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | – | – | |
| PANTHER | 1 | 484 | 484 | 6.00E-230 | – | |
| PANTHER | 1 | 484 | 484 | 6.00E-230 | – | |
| PIRSF | 3 | 489 | 487 | 2.10E-115 | ||
| SUPERFAMILY | 29 | 476 | 448 | 6.84E-60 | ||
| Gene3D | 91 | 476 | 386 | 5.40E-66 | ||
| SMART | 122 | 164 | 43 | 0.066 | ||
| Pfam | 128 | 164 | 37 | 1.00E-05 | ||
| CDD | 132 | 246 | 115 | 1.82E-11 | – | |
| SMART | 166 | 205 | 40 | 1.7 | ||
| SMART | 207 | 247 | 41 | 0.0029 | ||
| Pfam | 208 | 245 | 38 | 8.40E-06 | ||
| SMART | 250 | 291 | 42 | 9.5 | ||
| CDD | 256 | 382 | 127 | 1.68E-12 | – | |
| SMART | 293 | 334 | 42 | 47 | ||
| SMART | 341 | 382 | 42 | 6.4 | ||
| Pfam | 352 | 382 | 31 | 6.00E-06 | ||
| SMART | 384 | 424 | 41 | 0.12 | ||
| Pfam | 385 | 423 | 39 | 1.40E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Protein import into nucleus | The directed movement of a protein from the cytoplasm to the nucleus. | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. | ||
| Molecular function | Nuclear import signal receptor activity | Combining with a nuclear import signal (NIS) on a cargo to be transported, to mediate transport of the cargo through the nuclear pore, from the cytoplasm to the nuclear lumen. The cargo can be either a RNA or a protein. |
Expression pattern of Lj5g3v0626520.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0626520.2, powered by CORGI.
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