Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj5g3v0657180.1

Overview

Field Value
Gene ID Lj5g3v0657180
Transcript ID Lj5g3v0657180.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable receptor-like protein kinase At5g47070-like [Glycine max] gi|356572460|ref|XP_003554386.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
1 35 35 1.90E-260 –
PANTHER
PTHR27001:SF145
1 35 35 1.90E-260 –
MobiDBLite
mobidb-lite
50 77 28 – –
SUPERFAMILY
SSF56112
74 379 306 2.00E-79
IPR011009
PANTHER
PTHR27001
74 389 316 1.90E-260 –
PANTHER
PTHR27001:SF145
74 389 316 1.90E-260 –
Gene3D
G3DSA:2.60.120.200
76 111 36 4.00E-06
IPR013320
ProSiteProfiles
PS50011
98 383 286 40.725
IPR000719
Pfam
PF07714
103 377 275 1.90E-47
IPR001245
ProSitePatterns
PS00107
104 132 29 –
IPR017441
CDD
cd14066
104 382 279 1.04E-90 –
Gene3D
G3DSA:3.30.200.20
112 170 59 4.30E-21 –
Gene3D
G3DSA:1.10.510.10
171 378 208 4.70E-47 –
PANTHER
PTHR27001:SF145
414 435 22 1.90E-260 –
PANTHER
PTHR27001
414 435 22 1.90E-260 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj5g3v0657180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0657180.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.