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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0856890 |
| Transcript ID | Lj5g3v0856890.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-dependent protein kinase 1-like [Glycine max] gi|356498647|ref|XP_003518161.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 210 | 210 | – | – | |
| PANTHER | 8 | 357 | 350 | 0 | – | |
| PANTHER | 8 | 357 | 350 | 0 | – | |
| Gene3D | 25 | 125 | 101 | 3.30E-31 | – | |
| SUPERFAMILY | 26 | 287 | 262 | 2.56E-83 | ||
| Pfam | 28 | 286 | 259 | 5.50E-73 | ||
| ProSiteProfiles | 28 | 286 | 259 | 46.76 | ||
| SMART | 28 | 286 | 259 | 3.30E-98 | ||
| CDD | 28 | 285 | 258 | 2.31E-141 | – | |
| ProSitePatterns | 34 | 61 | 28 | – | ||
| Gene3D | 126 | 307 | 182 | 1.10E-60 | – | |
| ProSitePatterns | 148 | 160 | 13 | – | ||
| Phobius | 211 | 229 | 19 | – | – | |
| Phobius | 230 | 357 | 128 | – | – | |
| SUPERFAMILY | 315 | 354 | 40 | 1.82E-09 | ||
| CDD | 316 | 354 | 39 | 2.94E-07 | ||
| Gene3D | 323 | 355 | 33 | 2.50E-09 | ||
| ProSiteProfiles | 329 | 357 | 29 | 14.625 | ||
| Pfam | 334 | 355 | 22 | 2.30E-07 | ||
| ProSitePatterns | 342 | 354 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj5g3v0856890.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0856890.2, powered by CORGI.
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