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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1175630 |
| Transcript ID | Lj5g3v1175630.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetratricopeptide repeat protein 7B-like isoform X1 [Cicer arietinum] gi|502116242|ref|XP_004495349.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 409 | 409 | – | – | |
| MobiDBLite | 42 | 68 | 27 | – | – | |
| PANTHER | 48 | 730 | 683 | 0 | – | |
| PANTHER | 48 | 730 | 683 | 0 | – | |
| Gene3D | 68 | 113 | 46 | 1.50E-07 | ||
| Gene3D | 147 | 184 | 38 | 1.50E-07 | ||
| SMART | 154 | 187 | 34 | 92 | ||
| Gene3D | 305 | 306 | 2 | 1.50E-07 | ||
| SMART | 339 | 372 | 34 | 360 | ||
| Gene3D | 342 | 369 | 28 | 1.50E-07 | ||
| Phobius | 410 | 427 | 18 | – | – | |
| Phobius | 428 | 733 | 306 | – | – | |
| SUPERFAMILY | 441 | 526 | 86 | 8.22E-06 | ||
| Gene3D | 442 | 550 | 109 | 1.50E-07 | ||
| SMART | 496 | 529 | 34 | 170 | ||
| Coils | 534 | 554 | 21 | – | – | |
| Gene3D | 551 | 727 | 177 | 6.70E-20 | ||
| SUPERFAMILY | 582 | 703 | 122 | 3.48E-16 | ||
| ProSiteProfiles | 588 | 727 | 140 | 18.76 | ||
| ProSiteProfiles | 588 | 621 | 34 | 7.08 | ||
| SMART | 588 | 621 | 34 | 1.7 | ||
| SMART | 622 | 655 | 34 | 0.0056 | ||
| ProSiteProfiles | 622 | 655 | 34 | 11.623 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1175630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1175630.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.