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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1176810 |
| Transcript ID | Lj5g3v1176810.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phosphate transporter PHO1-like [Glycine max] gi|356535386|ref|XP_003536227.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 372 | 372 | – | – | |
| ProSiteProfiles | 2 | 322 | 321 | 32.511 | ||
| Pfam | 2 | 38 | 37 | 1.40E-12 | ||
| PANTHER | 2 | 56 | 55 | 0 | – | |
| PANTHER | 2 | 56 | 55 | 0 | – | |
| CDD | 3 | 317 | 315 | 6.83E-40 | – | |
| PANTHER | 79 | 162 | 84 | 0 | – | |
| Pfam | 79 | 324 | 246 | 2.20E-53 | ||
| PANTHER | 79 | 162 | 84 | 0 | – | |
| MobiDBLite | 154 | 205 | 52 | – | – | |
| PANTHER | 264 | 770 | 507 | 0 | – | |
| PANTHER | 264 | 770 | 507 | 0 | – | |
| Phobius | 373 | 394 | 22 | – | – | |
| TMHMM | 373 | 395 | 23 | – | – | |
| Phobius | 395 | 413 | 19 | – | – | |
| Phobius | 414 | 436 | 23 | – | – | |
| Pfam | 414 | 747 | 334 | 7.50E-85 | ||
| TMHMM | 415 | 437 | 23 | – | – | |
| Phobius | 437 | 460 | 24 | – | – | |
| Phobius | 461 | 482 | 22 | – | – | |
| TMHMM | 462 | 484 | 23 | – | – | |
| Phobius | 483 | 493 | 11 | – | – | |
| TMHMM | 494 | 516 | 23 | – | – | |
| Phobius | 494 | 513 | 20 | – | – | |
| Phobius | 514 | 524 | 11 | – | – | |
| TMHMM | 523 | 545 | 23 | – | – | |
| Phobius | 525 | 545 | 21 | – | – | |
| Phobius | 546 | 580 | 35 | – | – | |
| ProSiteProfiles | 579 | 770 | 192 | 24.805 | ||
| TMHMM | 581 | 598 | 18 | – | – | |
| Phobius | 581 | 598 | 18 | – | – | |
| Phobius | 599 | 641 | 43 | – | – | |
| TMHMM | 642 | 664 | 23 | – | – | |
| Phobius | 642 | 661 | 20 | – | – | |
| Phobius | 662 | 689 | 28 | – | – | |
| TMHMM | 689 | 706 | 18 | – | – | |
| Phobius | 690 | 710 | 21 | – | – | |
| Phobius | 711 | 770 | 60 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v1176810.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1176810.2, powered by CORGI.
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