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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1356090 |
| Transcript ID | Lj5g3v1356090.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nitrate transporter 1.5-like [Cicer arietinum] gi|502146609|ref|XP_004506528.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 165 | 165 | 8.613 | ||
| PANTHER | 1 | 220 | 220 | 1.00E-114 | ||
| Phobius | 1 | 21 | 21 | – | – | |
| CDD | 1 | 158 | 158 | 1.64E-08 | ||
| PANTHER | 1 | 220 | 220 | 1.00E-114 | – | |
| SUPERFAMILY | 4 | 166 | 163 | 1.70E-15 | ||
| Gene3D | 4 | 159 | 156 | 3.80E-12 | – | |
| Phobius | 22 | 48 | 27 | – | – | |
| Pfam | 23 | 223 | 201 | 4.10E-39 | ||
| TMHMM | 26 | 48 | 23 | – | – | |
| Phobius | 49 | 67 | 19 | – | – | |
| TMHMM | 68 | 90 | 23 | – | – | |
| Phobius | 68 | 90 | 23 | – | – | |
| Phobius | 91 | 110 | 20 | – | – | |
| TMHMM | 110 | 132 | 23 | – | – | |
| Phobius | 111 | 133 | 23 | – | – | |
| ProSitePatterns | 112 | 124 | 13 | – | ||
| Phobius | 134 | 138 | 5 | – | – | |
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 139 | 158 | 20 | – | – | |
| Phobius | 159 | 267 | 109 | – | – | |
| MobiDBLite | 219 | 267 | 49 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v1356090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1356090.1, powered by CORGI.
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