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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1529840 |
| Transcript ID | Lj5g3v1529840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: solute carrier family 40 member 3, chloroplastic-like [Cicer arietinum] gi|502116938|ref|XP_004495645.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1 | 1 | – | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| Phobius | 2 | 13 | 12 | – | – | |
| Phobius | 14 | 22 | 9 | – | – | |
| Phobius | 23 | 175 | 153 | – | – | |
| PANTHER | 88 | 594 | 507 | 0 | – | |
| PANTHER | 88 | 594 | 507 | 0 | – | |
| Pfam | 146 | 566 | 421 | 9.90E-112 | ||
| SUPERFAMILY | 149 | 582 | 434 | 2.22E-09 | ||
| TMHMM | 175 | 197 | 23 | – | – | |
| Phobius | 176 | 198 | 23 | – | – | |
| Phobius | 199 | 209 | 11 | – | – | |
| TMHMM | 209 | 231 | 23 | – | – | |
| Phobius | 210 | 232 | 23 | – | – | |
| Phobius | 233 | 243 | 11 | – | – | |
| Phobius | 244 | 268 | 25 | – | – | |
| TMHMM | 246 | 268 | 23 | – | – | |
| Phobius | 269 | 297 | 29 | – | – | |
| TMHMM | 291 | 313 | 23 | – | – | |
| Phobius | 298 | 317 | 20 | – | – | |
| Phobius | 318 | 322 | 5 | – | – | |
| TMHMM | 323 | 342 | 20 | – | – | |
| Phobius | 323 | 342 | 20 | – | – | |
| Phobius | 343 | 388 | 46 | – | – | |
| Phobius | 389 | 408 | 20 | – | – | |
| Gene3D | 397 | 585 | 189 | 1.30E-05 | – | |
| TMHMM | 397 | 419 | 23 | – | – | |
| Phobius | 409 | 427 | 19 | – | – | |
| Phobius | 428 | 448 | 21 | – | – | |
| TMHMM | 429 | 451 | 23 | – | – | |
| Phobius | 449 | 459 | 11 | – | – | |
| TMHMM | 456 | 478 | 23 | – | – | |
| Phobius | 460 | 480 | 21 | – | – | |
| Phobius | 481 | 485 | 5 | – | – | |
| TMHMM | 483 | 505 | 23 | – | – | |
| Phobius | 486 | 503 | 18 | – | – | |
| Phobius | 504 | 523 | 20 | – | – | |
| Phobius | 524 | 549 | 26 | – | – | |
| TMHMM | 526 | 548 | 23 | – | – | |
| Phobius | 550 | 554 | 5 | – | – | |
| Phobius | 555 | 578 | 24 | – | – | |
| TMHMM | 558 | 577 | 20 | – | – | |
| Phobius | 579 | 594 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion transmembrane transporter activity | Enables the transfer of iron (Fe) ions from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Iron ion transmembrane transport | A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj5g3v1529840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1529840.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.