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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1598300 |
| Transcript ID | Lj5g3v1598300.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like [Glycine max] gi|356536682|ref|XP_003536865.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 55 | 485 | 431 | 8.50E-178 | – | |
| PANTHER | 55 | 485 | 431 | 8.50E-178 | – | |
| Gene3D | 136 | 328 | 193 | 3.50E-13 | ||
| ProSiteProfiles | 138 | 172 | 35 | 10.369 | ||
| TIGRFAM | 140 | 171 | 32 | 1.60E-06 | ||
| Pfam | 140 | 169 | 30 | 1.70E-06 | ||
| ProSiteProfiles | 173 | 206 | 34 | 6.73 | ||
| Pfam | 174 | 219 | 46 | 1.50E-07 | ||
| TIGRFAM | 175 | 206 | 32 | 1.60E-04 | ||
| SUPERFAMILY | 207 | 410 | 204 | 3.04E-08 | ||
| ProSiteProfiles | 207 | 241 | 35 | 8.55 | ||
| TIGRFAM | 209 | 236 | 28 | 1.40E-04 | ||
| ProSiteProfiles | 243 | 273 | 31 | 7.596 | ||
| Pfam | 246 | 272 | 27 | 0.028 | ||
| ProSiteProfiles | 278 | 312 | 35 | 5.623 | ||
| ProSiteProfiles | 347 | 381 | 35 | 6.062 | ||
| Gene3D | 364 | 374 | 11 | 3.50E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1598300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1598300.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.