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Lj5g3v1958040.1

Overview

Field Value
Gene ID Lj5g3v1958040
Transcript ID Lj5g3v1958040.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] gi|356542427|ref|XP_003539668.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27000:SF1
1 308 308 1.20E-155 –
PANTHER
PTHR27000
1 308 308 1.20E-155 –
Gene3D
G3DSA:3.80.10.10
2 280 279 4.90E-59
IPR032675
SUPERFAMILY
SSF52058
3 280 278 3.29E-49
IPR032675
Pfam
PF00560
102 119 18 1.1
IPR001611
Pfam
PF00560
124 142 19 1.7
IPR001611
Pfam
PF13855
173 230 58 7.40E-07
IPR001611
MobiDBLite
mobidb-lite
292 312 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj5g3v1958040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1958040.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.