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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1988610 |
| Transcript ID | Lj5g3v1988610.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Receptor-like protein kinase [Medicago truncatula] gi|358348670|ref|XP_003638367.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 266 | 266 | – | – | |
| PANTHER | 2 | 319 | 318 | 1.00E-141 | – | |
| Gene3D | 2 | 85 | 84 | 1.00E-47 | ||
| PANTHER | 2 | 319 | 318 | 1.00E-141 | – | |
| SUPERFAMILY | 3 | 85 | 83 | 9.86E-39 | ||
| SMART | 6 | 30 | 25 | 110 | ||
| ProSiteProfiles | 8 | 30 | 23 | 5.309 | ||
| ProSiteProfiles | 34 | 56 | 23 | 4.724 | ||
| SMART | 56 | 80 | 25 | 36 | ||
| ProSiteProfiles | 58 | 81 | 24 | 5.933 | ||
| Gene3D | 127 | 236 | 110 | 1.00E-47 | ||
| SUPERFAMILY | 127 | 236 | 110 | 9.86E-39 | ||
| SMART | 145 | 169 | 25 | 130 | ||
| Pfam | 147 | 206 | 60 | 2.50E-10 | ||
| ProSiteProfiles | 147 | 169 | 23 | 5.563 | ||
| ProSiteProfiles | 171 | 193 | 23 | 6.58 | ||
| PRINTS | 172 | 185 | 14 | 4.20E-06 | – | |
| PRINTS | 193 | 206 | 14 | 4.20E-06 | – | |
| SMART | 193 | 216 | 24 | 24 | ||
| ProSiteProfiles | 195 | 216 | 22 | 7.396 | ||
| Phobius | 267 | 290 | 24 | – | – | |
| TMHMM | 268 | 290 | 23 | – | – | |
| Phobius | 291 | 331 | 41 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1988610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1988610.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.