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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2017090 |
| Transcript ID | Lj5g3v2017090.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like [Glycine max] gi|356535894|ref|XP_003536477.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | – | – | |
| PANTHER | 42 | 152 | 111 | 9.50E-175 | – | |
| PANTHER | 42 | 152 | 111 | 9.50E-175 | – | |
| MobiDBLite | 47 | 85 | 39 | – | – | |
| SUPERFAMILY | 58 | 132 | 75 | 1.13E-20 | ||
| Gene3D | 62 | 133 | 72 | 1.60E-22 | ||
| ProSiteProfiles | 73 | 133 | 61 | 17.896 | ||
| SMART | 74 | 137 | 64 | 1.10E-18 | ||
| CDD | 75 | 133 | 59 | 1.20E-19 | – | |
| Pfam | 76 | 131 | 56 | 4.60E-19 | ||
| ProSitePatterns | 108 | 131 | 24 | – | ||
| Coils | 127 | 162 | 36 | – | – | |
| PANTHER | 181 | 194 | 14 | 9.50E-175 | – | |
| PANTHER | 181 | 194 | 14 | 9.50E-175 | – | |
| ProSiteProfiles | 277 | 514 | 238 | 41.462 | ||
| SUPERFAMILY | 279 | 511 | 233 | 1.25E-30 | – | |
| CDD | 281 | 510 | 230 | 1.87E-109 | – | |
| SMART | 286 | 511 | 226 | 1.10E-30 | ||
| Pfam | 287 | 510 | 224 | 1.30E-44 | ||
| Gene3D | 372 | 482 | 111 | 2.20E-04 | ||
| PANTHER | 487 | 648 | 162 | 9.50E-175 | – | |
| PANTHER | 487 | 648 | 162 | 9.50E-175 | – | |
| SUPERFAMILY | 530 | 646 | 117 | 1.51E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of Lj5g3v2017090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2017090.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.