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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2258470 |
| Transcript ID | Lj5g3v2258470.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 464 | 450 | 0 | – | |
| PANTHER | 15 | 464 | 450 | 0 | – | |
| SUPERFAMILY | 39 | 222 | 184 | 3.79E-05 | ||
| ProSiteProfiles | 52 | 86 | 35 | 10.304 | ||
| Pfam | 55 | 84 | 30 | 9.30E-05 | ||
| TIGRFAM | 55 | 87 | 33 | 3.40E-05 | ||
| ProSiteProfiles | 122 | 152 | 31 | 7.213 | ||
| Pfam | 127 | 153 | 27 | 0.035 | ||
| Gene3D | 150 | 333 | 184 | 8.30E-08 | ||
| ProSiteProfiles | 153 | 183 | 31 | 10.567 | ||
| TIGRFAM | 155 | 185 | 31 | 2.30E-07 | ||
| ProSiteProfiles | 184 | 218 | 35 | 12.025 | ||
| Pfam | 184 | 231 | 48 | 2.50E-08 | ||
| SUPERFAMILY | 185 | 448 | 264 | 5.48E-08 | ||
| TIGRFAM | 187 | 215 | 29 | 1.20E-07 | ||
| ProSiteProfiles | 219 | 253 | 35 | 7.487 | ||
| ProSiteProfiles | 254 | 284 | 31 | 6.807 | ||
| Pfam | 259 | 279 | 21 | 0.2 | ||
| ProSiteProfiles | 287 | 321 | 35 | 10.885 | ||
| Pfam | 287 | 334 | 48 | 1.90E-10 | ||
| TIGRFAM | 290 | 323 | 34 | 3.30E-06 | ||
| ProSiteProfiles | 322 | 356 | 35 | 10.687 | ||
| TIGRFAM | 324 | 357 | 34 | 1.90E-04 | ||
| ProSiteProfiles | 357 | 387 | 31 | 6.873 | ||
| Gene3D | 400 | 444 | 45 | 8.30E-08 | ||
| ProSiteProfiles | 423 | 457 | 35 | 6.555 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2258470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2258470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.