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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2288700 |
| Transcript ID | Lj5g3v2288700.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | IGN1 [Lotus japonicus] gi|128168562|dbj|BAF48666.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 53 | 53 | – | – | |
| Phobius | 1 | 422 | 422 | – | – | |
| PANTHER | 14 | 596 | 583 | 0 | – | |
| PANTHER | 14 | 596 | 583 | 0 | – | |
| Gene3D | 73 | 100 | 28 | 4.50E-25 | ||
| SMART | 73 | 102 | 30 | 510 | ||
| Pfam | 78 | 192 | 115 | 2.50E-14 | ||
| SUPERFAMILY | 78 | 350 | 273 | 8.55E-52 | ||
| CDD | 131 | 257 | 127 | 2.62E-28 | – | |
| Gene3D | 134 | 214 | 81 | 4.50E-25 | ||
| ProSiteProfiles | 136 | 346 | 211 | 44.856 | ||
| SMART | 136 | 167 | 32 | 0.017 | ||
| ProSiteProfiles | 136 | 160 | 25 | 8.63 | ||
| ProSiteProfiles | 168 | 190 | 23 | 9.805 | ||
| SMART | 168 | 197 | 30 | 0.008 | ||
| Pfam | 202 | 262 | 61 | 6.70E-12 | ||
| SMART | 202 | 231 | 30 | 0.81 | ||
| CDD | 205 | 325 | 121 | 6.12E-31 | – | |
| Gene3D | 215 | 246 | 32 | 1.10E-12 | ||
| ProSiteProfiles | 236 | 268 | 33 | 12.823 | ||
| SMART | 236 | 265 | 30 | 3.20E-05 | ||
| Gene3D | 247 | 347 | 101 | 2.00E-27 | ||
| Pfam | 269 | 332 | 64 | 1.10E-11 | ||
| SMART | 270 | 299 | 30 | 7.50E-04 | ||
| ProSiteProfiles | 270 | 302 | 33 | 10.499 | ||
| SMART | 304 | 334 | 31 | 0.0021 | ||
| Pfam | 418 | 524 | 107 | 3.60E-26 | ||
| TMHMM | 423 | 445 | 23 | – | – | |
| Phobius | 423 | 445 | 23 | – | – | |
| Phobius | 446 | 464 | 19 | – | – | |
| Phobius | 465 | 485 | 21 | – | – | |
| TMHMM | 465 | 487 | 23 | – | – | |
| Phobius | 486 | 504 | 19 | – | – | |
| Phobius | 505 | 525 | 21 | – | – | |
| TMHMM | 507 | 524 | 18 | – | – | |
| Phobius | 526 | 530 | 5 | – | – | |
| Phobius | 531 | 556 | 26 | – | – | |
| TMHMM | 534 | 556 | 23 | – | – | |
| Phobius | 557 | 596 | 40 | – | – | |
| MobiDBLite | 564 | 596 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2288700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2288700.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.