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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2297970 |
| Transcript ID | Lj5g3v2297970.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DUF21 domain-containing protein At1g47330-like isoform X1 [Cicer arietinum] gi|502131534|ref|XP_004501015.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 311 | 311 | 7.50E-286 | – | |
| PANTHER | 1 | 311 | 311 | 7.50E-286 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 12 | 42 | 31 | – | – | |
| Pfam | 18 | 190 | 173 | 1.20E-33 | ||
| Phobius | 43 | 70 | 28 | – | – | |
| Phobius | 71 | 91 | 21 | – | – | |
| TMHMM | 89 | 111 | 23 | – | – | |
| Phobius | 92 | 96 | 5 | – | – | |
| Phobius | 97 | 116 | 20 | – | – | |
| Phobius | 117 | 122 | 6 | – | – | |
| Phobius | 123 | 146 | 24 | – | – | |
| TMHMM | 124 | 146 | 23 | – | – | |
| Phobius | 147 | 488 | 342 | – | – | |
| Gene3D | 194 | 305 | 112 | 2.80E-08 | – | |
| SUPERFAMILY | 197 | 310 | 114 | 2.40E-14 | – | |
| ProSiteProfiles | 210 | 271 | 62 | 8.074 | ||
| CDD | 217 | 311 | 95 | 1.89E-21 | – | |
| ProSiteProfiles | 275 | 339 | 65 | 6.589 | ||
| ProSiteProfiles | 346 | 420 | 75 | 5.766 | ||
| PANTHER | 390 | 443 | 54 | 7.50E-286 | – | |
| PANTHER | 390 | 443 | 54 | 7.50E-286 | – | |
| MobiDBLite | 439 | 488 | 50 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v2297970.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2297970.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.