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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0002290 |
| Transcript ID | Lj6g3v0002290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 23 | 202 | 180 | 7.97E-05 | ||
| PANTHER | 36 | 522 | 487 | 4.40E-176 | – | |
| PANTHER | 36 | 522 | 487 | 4.40E-176 | – | |
| Gene3D | 41 | 55 | 15 | 4.70E-09 | ||
| ProSiteProfiles | 58 | 92 | 35 | 6.993 | ||
| Gene3D | 92 | 145 | 54 | 4.70E-09 | ||
| ProSiteProfiles | 93 | 127 | 35 | 9.613 | ||
| Pfam | 93 | 140 | 48 | 7.10E-09 | ||
| TIGRFAM | 95 | 128 | 34 | 2.70E-05 | ||
| ProSiteProfiles | 128 | 162 | 35 | 8.418 | ||
| ProSiteProfiles | 163 | 197 | 35 | 7.695 | ||
| Pfam | 165 | 190 | 26 | 1.1 | ||
| Pfam | 198 | 247 | 50 | 3.70E-18 | ||
| ProSiteProfiles | 199 | 233 | 35 | 12.529 | ||
| TIGRFAM | 201 | 235 | 35 | 2.50E-08 | ||
| ProSiteProfiles | 234 | 260 | 27 | 6.336 | ||
| Pfam | 264 | 311 | 48 | 7.40E-15 | ||
| ProSiteProfiles | 264 | 298 | 35 | 11.696 | ||
| TIGRFAM | 267 | 300 | 34 | 1.90E-08 | ||
| SUPERFAMILY | 268 | 374 | 107 | 7.97E-05 | ||
| ProSiteProfiles | 299 | 333 | 35 | 12.54 | ||
| TIGRFAM | 301 | 335 | 35 | 1.20E-10 | ||
| Gene3D | 302 | 365 | 64 | 4.70E-09 | ||
| SUPERFAMILY | 303 | 503 | 201 | 6.54E-07 | – | |
| Pfam | 333 | 382 | 50 | 8.60E-17 | ||
| ProSiteProfiles | 334 | 368 | 35 | 12.627 | ||
| TIGRFAM | 337 | 370 | 34 | 2.30E-08 | ||
| ProSiteProfiles | 369 | 403 | 35 | 11.049 | ||
| Gene3D | 434 | 502 | 69 | 4.70E-09 | ||
| Pfam | 435 | 484 | 50 | 9.80E-15 | ||
| ProSiteProfiles | 436 | 470 | 35 | 12.529 | ||
| TIGRFAM | 439 | 471 | 33 | 8.50E-11 | ||
| ProSiteProfiles | 471 | 501 | 31 | 7.75 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v0002290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0002290.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.