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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0084300 |
| Transcript ID | Lj6g3v0084300.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Calcium-binding tetratricopeptide family protein [Theobroma cacao] gi|508723021|gb|EOY14918.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 499 | 499 | 1.00E-112 | – | |
| PANTHER | 1 | 499 | 499 | 1.00E-112 | – | |
| SUPERFAMILY | 4 | 77 | 74 | 1.55E-08 | ||
| Gene3D | 4 | 75 | 72 | 1.70E-09 | ||
| ProSiteProfiles | 6 | 41 | 36 | 11.835 | ||
| Gene3D | 233 | 494 | 262 | 6.50E-53 | ||
| ProSiteProfiles | 236 | 269 | 34 | 8.142 | ||
| SMART | 236 | 269 | 34 | 1.8 | ||
| ProSiteProfiles | 236 | 481 | 246 | 46.719 | ||
| SUPERFAMILY | 242 | 481 | 240 | 1.40E-34 | ||
| ProSiteProfiles | 270 | 303 | 34 | 5.812 | ||
| SMART | 270 | 303 | 34 | 190 | ||
| ProSiteProfiles | 312 | 345 | 34 | 7.169 | ||
| SMART | 312 | 345 | 34 | 0.65 | ||
| ProSiteProfiles | 346 | 379 | 34 | 9.47 | ||
| SMART | 346 | 379 | 34 | 0.023 | ||
| Pfam | 352 | 412 | 61 | 4.10E-08 | – | |
| SMART | 380 | 413 | 34 | 3.80E-05 | ||
| ProSiteProfiles | 380 | 413 | 34 | 11.269 | ||
| SMART | 414 | 447 | 34 | 2.10E-05 | ||
| ProSiteProfiles | 414 | 447 | 34 | 11.682 | ||
| Pfam | 418 | 476 | 59 | 2.40E-08 | – | |
| SMART | 448 | 481 | 34 | 30 | ||
| Gene3D | 536 | 639 | 104 | 2.40E-04 | ||
| ProSiteProfiles | 601 | 636 | 36 | 6.507 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v0084300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0084300.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.