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Lj6g3v0156120.1

Overview

Field Value
Gene ID Lj6g3v0156120
Transcript ID Lj6g3v0156120.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like [Glycine max] gi|356577497|ref|XP_003556861.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22884
2 415 414 4.30E-75 –
PANTHER
PTHR22884:SF370
2 415 414 4.30E-75 –
SUPERFAMILY
SSF88697
63 240 178 4.97E-41
IPR015947
SMART
SM00466
76 235 160 2.50E-38
IPR003105
Pfam
PF02182
80 235 156 4.80E-37
IPR003105
ProSiteProfiles
PS51015
81 231 151 36.092
IPR003105
Gene3D
G3DSA:2.30.280.10
92 275 184 1.70E-37
IPR003105
MobiDBLite
mobidb-lite
251 278 28 – –
Pfam
PF00856
253 414 162 1.20E-16
IPR001214
SUPERFAMILY
SSF82199
268 415 148 3.92E-32 –
Gene3D
G3DSA:2.170.270.10
276 355 80 1.10E-05 –
ProSiteProfiles
PS50280
328 414 87 16.436
IPR001214
SMART
SM00317
328 420 93 3.50E-19
IPR001214
Gene3D
G3DSA:2.170.270.10
360 419 60 8.40E-21 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj6g3v0156120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0156120.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.