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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0524040 |
| Transcript ID | Lj6g3v0524040.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chlorophyll a-b binding protein CP29.3, chloroplastic-like [Glycine max] gi|356568441|ref|XP_003552419.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | – | – | |
| PANTHER | 12 | 158 | 147 | 6.20E-115 | ||
| PANTHER | 12 | 158 | 147 | 6.20E-115 | – | |
| SUPERFAMILY | 14 | 157 | 144 | 1.57E-40 | – | |
| Pfam | 15 | 144 | 130 | 6.30E-40 | ||
| Gene3D | 16 | 156 | 141 | 6.30E-51 | ||
| TMHMM | 26 | 48 | 23 | – | – | |
| Phobius | 30 | 49 | 20 | – | – | |
| Phobius | 50 | 68 | 19 | – | – | |
| TMHMM | 63 | 85 | 23 | – | – | |
| Phobius | 69 | 88 | 20 | – | – | |
| Phobius | 89 | 131 | 43 | – | – | |
| Phobius | 132 | 156 | 25 | – | – | |
| TMHMM | 135 | 157 | 23 | – | – | |
| Phobius | 157 | 160 | 4 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Photosynthesis, light harvesting | Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj6g3v0524040.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0524040.2, powered by CORGI.
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