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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0922180 |
| Transcript ID | Lj6g3v0922180.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Citrate synthase [Medicago truncatula] gi|357459271|ref|XP_003599916.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 33 | 494 | 462 | 2.10E-290 | – | |
| PANTHER | 33 | 494 | 462 | 2.10E-290 | ||
| CDD | 77 | 484 | 408 | 0 | – | |
| SUPERFAMILY | 84 | 489 | 406 | 1.31E-142 | ||
| Pfam | 104 | 472 | 369 | 1.30E-134 | ||
| Gene3D | 110 | 344 | 235 | 1.70E-90 | ||
| PRINTS | 229 | 242 | 14 | 1.50E-43 | ||
| PRINTS | 283 | 298 | 16 | 1.50E-43 | ||
| PRINTS | 305 | 333 | 29 | 1.50E-43 | ||
| Gene3D | 345 | 434 | 90 | 6.50E-40 | ||
| PRINTS | 358 | 378 | 21 | 1.50E-43 | ||
| ProSitePatterns | 365 | 377 | 13 | – | ||
| PRINTS | 420 | 436 | 17 | 1.50E-43 | ||
| PRINTS | 440 | 454 | 15 | 1.50E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
| Molecular function | Transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer. |
Expression pattern of Lj6g3v0922180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0922180.1, powered by CORGI.
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